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Existing prototype-based models offer intuitive explanations but typically operate at coarse granularity (sentence or document level) and fail to address the multi-label nature of real-world text classification. We propose ProtoSiTex, a semi-interpretable framework designed for fine-grained multi-label text classification. ProtoSiTex employs a dual-phase alternate training strategy: an unsupervised prototype discovery phase that learns semantically coherent and diverse prototypes, and a supervised classification phase that maps these prototypes to class labels. A hierarchical loss function enforces consistency across subsentence, sentence, and document levels, enhancing interpretability and alignment. 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